Install zalign by entering the following commands in the terminal:
sudo apt update sudo apt install zalign
Description:
parallel local alignment of biological sequences
zAlign is a local sequence aligner, especially intended for use with large biological DNA sequences, with more than 1Mbp (Millions of base pairs). It uses the Smith-Waterman exact algorithm with affine gap cost function to perform this task. . zAlign can be used both in distributed (clusters, for example) or standalone environments. Currently it has been tested on Linux and Sun Solaris, using both the MPICH (http://www.mcs.anl.gov/research/projects/mpi/mpich1/) and OpenMPI (http://www.open-mpi.org/) implementations. Ports for other Unix-like environments are highly considered.
Homepage: https://launchpad.net/zalign
Version: 0.9.1-3
Section: universe/science