Install subread by entering the following commands in the terminal:
sudo apt update sudo apt install subread
Description:
toolkit for processing next-gen sequencing data
Subread aligner can be used to align both gDNA-seq and RNA-seq reads. Subjunc aligner was specified designed for the detection of exon-exon junction. For the mapping of RNA-seq reads, Subread performs local alignments and Subjunc performs global alignments.
Homepage: http://sourceforge.net/projects/subread/
Version: 1.6.0+dfsg-1
Section: universe/science