Install sprai by entering the following commands in the terminal:
sudo apt update sudo apt install sprai
Description:
single-pass sequencing read accuracy improver
Sprai is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads. Instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.
Homepage: http://zombie.cb.k.u-tokyo.ac.jp/sprai/index.html
Version: 0.9.9.23+dfsg-1
Section: universe/science