Install sniffles by entering the following commands in the terminal:
sudo apt update sudo apt install sniffles
Description:
structural variation caller using third-generation sequencing
Sniffles is a structural variation caller using third-generation sequencing data such as those from Pacific Biosciences or Oxford Nanopore platforms. It detects all types of SVs using evidence from split-read alignments, high-mismatch regions, and coverage analysis.
Homepage: http://fritzsedlazeck.github.io/Sniffles
Version: 1.0.7+ds-1
Section: universe/science