Install sibsim4 by entering the following commands in the terminal:
sudo apt update sudo apt install sibsim4
Description:
align expressed RNA sequences on a DNA template
The SIBsim4 project is based on sim4, which is a program designed to align an expressed DNA sequence with a genomic sequence, allowing for introns. SIBsim4 is a fairly extensive rewrite of the original code with the following goals: * speed improvement; * allow large, chromosome scale, DNA sequences to be used; * provide more detailed output about splice types; * provide more detailed output about polyA sites; * misc code cleanups and fixes.
Homepage: http://sibsim4.sourceforge.net/
Version: 0.20-3
Section: universe/science