Install sga by entering the following commands in the terminal:
sudo apt update sudo apt install sga
Description:
de novo genome assembler that uses string graphs
The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads. . SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers' string graph formulation of assembly and uses the FM-index/Burrows-Wheeler transform to efficiently find overlaps between sequence reads.
Homepage: https://github.com/jts/sga
Version: 0.10.15-3
Section: universe/science