Install sambamba by entering the following commands in the terminal:
sudo apt update sudo apt install sambamba
Description:
tools for working with SAM/BAM data
Sambamba positions itself as a performant alternative to samtools and provides tools for * Powerful filtering with sambamba view --filter * Picard-like SAM header merging in the merge tool * Optional for operations on whole BAMs * Fast copying of a region to a new file with the slice tool * Duplicate marking/removal, using the Picard criteria
Homepage: https://github.com/lomereiter/sambamba
Version: 0.6.7-2
Section: universe/science