Install maq by entering the following commands in the terminal:
sudo apt update sudo apt install maq
Description:
maps short fixed-length polymorphic DNA sequence reads to reference sequences
Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2. . Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.
Homepage: http://maq.sourceforge.net/
Version: 0.7.1-7
Section: universe/science