Install libgkarrays1 by entering the following commands in the terminal:
sudo apt update sudo apt install libgkarrays1
Description:
library to query large collection of NGS sequences
Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche). . Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?). . Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.
Homepage: http://crac.gforge.inria.fr/gkarrays/
Version: 2.1.0+dfsg-1
Section: universe/libs