Install libfastahack-dev by entering the following commands in the terminal:
sudo apt update sudo apt install libfastahack-dev
Description:
library for indexing and sequence extraction from FASTA files (devel)
fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use. . Features: * FASTA index (.fai) generation for FASTA files * Sequence extraction * Subsequence extraction * Sequence statistics (currently only entropy is provided) . Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence. . This is the development package containing the statically linked library and the header files.
Homepage: https://github.com/ekg/fastahack
Version: 0.0+20160702-1
Section: universe/libdevel