Install kalign by entering the following commands in the terminal:
sudo apt update sudo apt install kalign
Description:
Global and progressive multiple sequence alignment
Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.
Homepage: http://msa.sbc.su.se/
Version: 1:2.03+20110620-4
Section: universe/science