Install freebayes by entering the following commands in the terminal:
sudo apt update sudo apt install freebayes
Description:
Bayesian haplotype-based polymorphism discovery and genotyping
FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.
Homepage: https://github.com/ekg/freebayes
Version: 1.1.0-1
Section: universe/science