Install assemblytics by entering the following commands in the terminal:
sudo apt update sudo apt install assemblytics
detect and analyze structural variants from a genome assembly
Assemblytics incorporates a unique anchor filtering approach to increase robustness to repetitive elements, and identifies six classes of variants based on their distinct alignment signatures. Assemblytics can be applied both to comparing aberrant genomes, such as human cancers, to a reference, or to identify differences between related species.